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virus strains s cerevisiae bj5465 atcc 208289  (ATCC)


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    Structured Review

    ATCC virus strains s cerevisiae bj5465 atcc 208289
    Virus Strains S Cerevisiae Bj5465 Atcc 208289, supplied by ATCC, used in various techniques. Bioz Stars score: 94/100, based on 25 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/saccharomyces+cerevisiae+strain+atcc/Saccharomyces+cerevisiae+Meyen+ex+E%2EC%2E+Hansen/10__1016_slash_j__isci__2026__117534-147-7-12
    Average 94 stars, based on 25 article reviews
    virus strains s cerevisiae bj5465 atcc 208289 - by Bioz Stars, 2026-10
    94/100 stars

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    other:

    Article Title: Benchmarking informatics workflows for data-independent acquisition single-cell proteomics.
    Article Snippet: First, 100 nL of 0.3% (w/v) RapiGest (Waters) was added to the insert tube with a sealing cap, reacted at 60 °C for 20min for cell lysis, and cooled to room temperature; then 100 nL of 20mM tris(2-carboxyethyl)phosphine was added to insert tube, reacted at room temperature for protein reduction; after that, 100 nL of 125mM iodoacetamidewas added, reacted at room temperature in the dark for 15min; then 100 nL of mixed enzyme solution containing 0.05μg·μL−1 trypsin (Promega, V5111) and0.05μg·μL−1 Lys-C (Promega, V1671) was added, reacted at 37 °C for 2 h; finally, 100 nL of 5% (v/v) formic acid was added to terminate the protein digestion for 30min at room temperature.

    Article Title: Mechanistic evidence that motif-gated domain recognition drives contact prediction in protein language models
    Article Snippet: As both open sources SAEs were only available on ESM-2-650M, we iterated over the set of proteins from Zhang et al. [2024] and picked the two that showcased the jump in the smaller 650M model. (1) DNA topoisomerase 2 ; Species: Saccharomyces cerevisiae strain ATCC 204508 / S288c (baker’s yeast) S288C; UniProt: P06786; PDB: 1PVG [ ] (2) Homoserine O-acetyltransferase ; Species: Haemophilus influenzae strain ATCC 51907 / DSM 11121 / KW20 / Rd ; UniProt: P45131; PDB: 2B61 [ ].

    Periodic Counter-current Chromatography:

    Article Title: Multi-channel smFRET study reveals a compact conformation of EF-G on the ribosome
    Article Snippet: .. Several representative EF-G/EF2 proteins are aligned: EFG_ECOLI, EF-G from E. coli strain K-12; EFG_STAAC, EF-G from Staphylococcus aureus strain COL; EFG_SYNP2, EF-G from Synechococcus sp. strain ATCC 27264 / PCC 7002 / PR-6 (Agmenellum quadruplicatum); EF2_YEAST, eEF2 from Saccharomyces cerevisiae strain ATCC 204508 / S288c; EF2_RABIT, eEF2 from Oryctolagus cuniculus; EF2_HUMAN, eEF2 from Homo sapiens. ..

    Article Title: Multi-Channel smFRET study reveals a Compact conformation of EF-G on the Ribosome
    Article Snippet: The gel was stained with Coomassie Brilliant Blue R-250, destained with 20% (v/v) ethanol, 5% (v/v) acetic acid, and photographed using ChemiDoc Touch Imaging System (Bio-Rad). .. Several representative EF-G/EF2 proteins are aligned: EFG_ECOLI, EF-G from E. coli strain K-12; EFG_STAAC, EF-G from Staphylococcus aureus strain COL; EFG_SYNP2, EF-G from Synechococcus sp. strain ATCC 27264 / PCC 7002 / PR-6 (Agmenellum quadruplicatum); EF2_YEAST, eEF2 from Saccharomyces cerevisiae strain ATCC 204508 / S288c; EF2_RABIT, eEF2 from Oryctolagus cuniculus; EF2_HUMAN, eEF2 from Homo sapiens. ..

    Data-dependent acquisition:

    Article Title: Benchmarking informatics workflows for data-independent acquisition single-cell proteomics
    Article Snippet: .. The raw DDA data were searched against Swiss-Prot/UniProtKB databases of Homo sapiens (organism ID 9606, 20 422 entries, access date 2023-03-21), Saccharomyces cerevisiae strain ATCC 204508/S288c (organism ID 559292, 6727 entries, access date 2023-07-14), and Escherichia coli strain K12 (organism ID 83333, 4530 entries, access date 2023-07-03). ..

    Binding Assay:

    Article Title: The potential role of liquid-liquid phase separation in the cellular fate of the compartments for unconventional protein secretion.
    Article Snippet: .. The yeast Acyl CoA Binding Protein open reading frame (Uniprot P31787) was amplified from the Saccharomyces cerevisiae strain ATCC 204508/S288c genome and cloned in the pETSUMO vector using BamH1 and Xho1 restriction sites. ..

    Amplification:

    Article Title: The potential role of liquid-liquid phase separation in the cellular fate of the compartments for unconventional protein secretion.
    Article Snippet: .. The yeast Acyl CoA Binding Protein open reading frame (Uniprot P31787) was amplified from the Saccharomyces cerevisiae strain ATCC 204508/S288c genome and cloned in the pETSUMO vector using BamH1 and Xho1 restriction sites. ..

    Clone Assay:

    Article Title: The potential role of liquid-liquid phase separation in the cellular fate of the compartments for unconventional protein secretion.
    Article Snippet: .. The yeast Acyl CoA Binding Protein open reading frame (Uniprot P31787) was amplified from the Saccharomyces cerevisiae strain ATCC 204508/S288c genome and cloned in the pETSUMO vector using BamH1 and Xho1 restriction sites. ..

    Plasmid Preparation:

    Article Title: The potential role of liquid-liquid phase separation in the cellular fate of the compartments for unconventional protein secretion.
    Article Snippet: .. The yeast Acyl CoA Binding Protein open reading frame (Uniprot P31787) was amplified from the Saccharomyces cerevisiae strain ATCC 204508/S288c genome and cloned in the pETSUMO vector using BamH1 and Xho1 restriction sites. ..

    Sequencing:

    Article Title: A bacterial family of fatty acid acyltransferases related to the Shigella effector IcsB.
    Article Snippet: .. Comet (release 2023.01 rev.2) (60) was used for peptide-spectrum matching against a protein sequence database of Saccharomyces cerevisiae strain ATCC 204508/S288C (Proteome ID, UP000002311) from the UniProtKB database along with the ‘common contaminants’ from the Max Planck Institute of Biochemistry (61), and DECOY-prefixed reverse protein sequences, therefore creating a total protein library of 12,610 sequences. ..

    Article Title: A bacterial family of fatty acid acyltransferases related to the Shigella effector IcsB
    Article Snippet: .. Comet (release 2023.01 rev.2) ( ) was used for peptide-spectrum matching against a protein sequence database of Saccharomyces cerevisiae strain ATCC 204508/S288C (Proteome ID, UP000002311) from the UniProtKB database along with the ‘common contaminants’ from the Max Planck Institute of Biochemistry , and DECOY-prefixed reverse protein sequences, therefore creating a total protein library of 12,610 sequences. ..



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    ATCC atcc 4098 strain
    (a) Graph depicting the overall velocity of viable and nonviable E. coli (ATCC 11775) and Salmonella Typhimurium (TT9079) cells as a function of the electric field. (b) Graph depicting the overall velocity of viable and nonviable S. cerevisiae (ATCC 4098) and S. cerevisiae (ATCC 9080) cells as a function of the electric field.
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    Image Search Results


    (a) Graph depicting the overall velocity of viable and nonviable E. coli (ATCC 11775) and Salmonella Typhimurium (TT9079) cells as a function of the electric field. (b) Graph depicting the overall velocity of viable and nonviable S. cerevisiae (ATCC 4098) and S. cerevisiae (ATCC 9080) cells as a function of the electric field.

    Journal: Analytical Chemistry

    Article Title: Electrophoresis: An Effective Viability Assessment Method across Cell Domains

    doi: 10.1021/acs.analchem.5c05986

    Figure Lengend Snippet: (a) Graph depicting the overall velocity of viable and nonviable E. coli (ATCC 11775) and Salmonella Typhimurium (TT9079) cells as a function of the electric field. (b) Graph depicting the overall velocity of viable and nonviable S. cerevisiae (ATCC 4098) and S. cerevisiae (ATCC 9080) cells as a function of the electric field.

    Article Snippet: Retention time data extracted from the electropherograms in b,d are summarized in , alongside values predicted by the COMSOL model. For the ATCC 4098 strain, the discrepancy between experimental ( t R , e ) and predicted ( t R , p ) retention times was 25% for viable cells and 6% for nonviable cells, indicating a reasonable agreement.

    Techniques:

    Separation between viable
and nonviable eukaryotic cells. (a) Images
of the viable and nonviable S. cerevisiae cells as they flow across the post array. (b) Electropherogram of
the separation between viable and nonviable S. cerevisiae cells (ATCC 4098) with a resolution of Rs = 1.5
and Δ t R = 99 s,
obtained at an average electric field of 55.5 V/cm in the post array.
(c) Images of the viable and nonviable S. cerevisiae cells as they flow across the post array. (b) Electropherogram of
the separation between viable and nonviable S. cerevisiae cells (ATCC 9080) with a resolution of Rs = 4.7
and Δ t R = 184 s,
obtained at an average electric field of 99.4 V/cm in the post array.
The electropherograms were obtained by employing the fluorescence
signal from the cells as they cross the interrogation window indicated
in 
</xref> b. The voltages
employed in these separations are listed in 
</xref> . Videos of these separations are included
in the Supporting Information as Videos S3 and S4 .

    Journal: Analytical Chemistry

    Article Title: Electrophoresis: An Effective Viability Assessment Method across Cell Domains

    doi: 10.1021/acs.analchem.5c05986

    Figure Lengend Snippet: Separation between viable and nonviable eukaryotic cells. (a) Images of the viable and nonviable S. cerevisiae cells as they flow across the post array. (b) Electropherogram of the separation between viable and nonviable S. cerevisiae cells (ATCC 4098) with a resolution of Rs = 1.5 and Δ t R = 99 s, obtained at an average electric field of 55.5 V/cm in the post array. (c) Images of the viable and nonviable S. cerevisiae cells as they flow across the post array. (b) Electropherogram of the separation between viable and nonviable S. cerevisiae cells (ATCC 9080) with a resolution of Rs = 4.7 and Δ t R = 184 s, obtained at an average electric field of 99.4 V/cm in the post array. The electropherograms were obtained by employing the fluorescence signal from the cells as they cross the interrogation window indicated in b. The voltages employed in these separations are listed in . Videos of these separations are included in the Supporting Information as Videos S3 and S4 .

    Article Snippet: Retention time data extracted from the electropherograms in b,d are summarized in , alongside values predicted by the COMSOL model. For the ATCC 4098 strain, the discrepancy between experimental ( t R , e ) and predicted ( t R , p ) retention times was 25% for viable cells and 6% for nonviable cells, indicating a reasonable agreement.

    Techniques: Fluorescence